Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899180.1_cds_XP_016449147.1_43731
CDS Infomation

[gene=LOC107774183] [db_xref=GeneID:107774183] [protein=ARM REPEAT PROTEIN INTERACTING WITH ABF2-like] [protein_id=XP_016449147.1] [location=complement(join(12559..12682,12773..12837,13452..13531,13621..13684,15335..15474,15567..15690,15938..15997,16147..16215,16309..16437,17451..17558,17673..17748,17910..18004,18123..18197,18278..18398,18491..18663,19539..19699,19839..20088))] [gbkey=CDS]
Sequence

ATGGAGAACCAGAAGCACAGCGAACGCTCGTCGGGCTCTGGTAGAAGGAGCTTGAAGAGA
AAGCTAAACGAAGATCGCGAAGACGATCGTACGGTTTCTTCTTCTTTATCTTCGGAAGAA
GCTCATCAAGATCTGGCGCGTGAAGTCCGTACACAGGTTGAGGTTCTAGAATCTTCCTTT
TTTTCATCCGAGTCAGATCGAGCCTCTGCAAAACGTGCTATACACGTTCTCTCTGAATTA
GCCAAAAACGAGGAAATTGTGAACGTAATTGTAGATTGTGGTGCTGTTCCGGCTTTGGTG
CAGCATCTAGAGGCGCCGCCATATGTGAGTGAAGGTGAAGGTAGTCACATGCCATACGAA
CATGAGGCTGAGAAAGGAAGTGCTTTTACGCTTGGGCTTCTTGCTATAAAACCAGAGCAC
CAACAACTCATTGTTGATGCTGGAGCTTTGCCTCATCTTGTTAATTTGCTGAAGAGGCAC
AGAGATGCTCAGAACTCTCGAGCAGTCAATGGTGTTATTCGTCGGGCAGCTGATGCAGTA
ACGAATCTTGCTCATGAAAACAGCAGCATCAAAACTCGTGTTAGGATTGAAGGTGGCATC
CCTCCACTTGTTGAGTTGCTTGAGTTTGTTGATTCAAAGGTGCAGAGAGCAGCTGCAGGA
GCCTTACGAACTTTGGCATTTAAGAATGATGAGAACAAAAATCAGATTGTGGAATGCAAT
GCACTCCCTACTCTTATACTAATGCTTCGGTCTGAAGATACTGCTATCCACTATGAAGCG
GTTGGAGTCATCGGAAATCTGGTGCACTCATCACCAAATATCAAGAAAGAAGTTCTTCTT
GCTGGAGCTTTACAACCTGTGATTGGGTTACTTAGTTCCTGCTGTTCAGAGAGCCAAAGG
GAAGCTGCTTTACTGCTAGGACAATTTGCAGCAACTGATACATACTGTAAGATTCATATT
GTTCAAAGAGGAGCAGTTCCACCGCTAATTGAGATGTTGCAATCTCCAGATGCTCAACTA
AGGGAAATGTCAGCCTTTGCTCTAGGGAGGTTGGCGCAGGACACACACAATCAGGCTGGT
ATTGCTCACTGTGGTGGGATTATCCCATTGTTGAAGCTCCTTGACTCAAAAAATGGATCA
TTGCAACACAATGCTGCATTTGCTCTATACGGGCTTGCTGATAATGAGGATAATGTTGCT
GATCTTATAAAAGTTGGAGGTGTTCAAAAGCTTCAGGATGGAGAATTTATTGTCCAACCA
ACTAGAGATTGTGTAGCAAAGACATTGAAGAGATTAGAAGAGAAGATCCATGGACGAATA
TTGGGCCATCTGATATATTTGATGCGCATTGGGGAGAAGGTTATTCAGAGACGAGTTGCT
TTGGCCCTGTCCCATCTTTGTTCACCGGATGACCAAAAAATAATTTTCATTAATAACGAT
GGATTAGAGTTGCTTTTGGAGCTCCTTGAATCAACAAACTTGAAGCACCAAAAAGATGGC
TCTGTAGCTTTGTGCAAATTGGCTAACAAAGCTAGCTCACTTTCGCAAGTCGATGCTGCT
CCTCCATCCCCGATACCTCAGGTTTATCTGGGAGAGCAGTATGTAAATAATTCTACGTTG
TCTGATGTGACATTTTTAGTTGAGGGCAAACGGTTTTATGCCCATAGGATTTGTTTACTA
GCTTCTTCTGATGCATTTCGAGCTATGTTTGATGGTGGCTACCGGGAGAGAGATGCCAAA
GACATAGAGATCCCAAATATCCGATGGGATGTTTTTGAGTTGATGATGAGGTACATATAC
ACAGGATCTGTAGATGTTAATTTGGATGTTGCACAGGATCTTCTAAGAGCTGCAGATCAN
CTGTGGAAAGTGTCTCTCTCATGTTCGAGTTGTCGGAGGCCTTTAATGCTTTGA

Peptide Sequence

PEP ID

XP_016449147.1
PEP Infomation

PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Nicotiana tabacum]
Sequence

MENQKHSERSSGSGRRSLKRKLNEDREDDRTVSSSLSSEEAHQDLAREVRTQVEVLESSF
FSSESDRASAKRAIHVLSELAKNEEIVNVIVDCGAVPALVQHLEAPPYVSEGEGSHMPYE
HEAEKGSAFTLGLLAIKPEHQQLIVDAGALPHLVNLLKRHRDAQNSRAVNGVIRRAADAV
TNLAHENSSIKTRVRIEGGIPPLVELLEFVDSKVQRAAAGALRTLAFKNDENKNQIVECN
ALPTLILMLRSEDTAIHYEAVGVIGNLVHSSPNIKKEVLLAGALQPVIGLLSSCCSESQR
EAALLLGQFAATDTYCKIHIVQRGAVPPLIEMLQSPDAQLREMSAFALGRLAQDTHNQAG
IAHCGGIIPLLKLLDSKNGSLQHNAAFALYGLADNEDNVADLIKVGGVQKLQDGEFIVQP
TRDCVAKTLKRLEEKIHGRILGHLIYLMRIGEKVIQRRVALALSHLCSPDDQKIIFINND
GLELLLELLESTNLKHQKDGSVALCKLANKASSLSQVDAAPPSPIPQVYLGEQYVNNSTL
SDVTFLVEGKRFYAHRICLLASSDAFRAMFDGGYRERDAKDIEIPNIRWDVFELMMRYIY
TGSVDVNLDVAQDLLRAADXLWKVSLSCSSCRRPLML

Transcript Sequence

Gene sequence data has not been registered.